Information for motif31


Reverse Opposite:

p-value:1e-13
log p-value:-3.137e+01
Information Content per bp:1.979
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets22.7 +/- 12.4bp
Average Position of motif in Background29.6 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------ACTAGTGC--
GANGTTAACTAGTTTNN

MA0158.1_HOXA5/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACTAGTGC
AATTAGTG-

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACTAGTGC-------
CGAACAGTGCTCACTAT

PB0200.1_Zfp187_2/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------ACTAGTGC--
NNAGGGACAAGGGCNC

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ACTAGTGC-----
ATCCACAGGTGCGAAAA

MA0122.1_Nkx3-2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACTAGTGC-
TTAAGTGGA

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ACTAGTGC--
TTGAGTGSTT

PB0096.1_Zfp187_1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACTAGTGC----
TTATTAGTACATAN

PH0039.1_Mnx1/Jaspar

Match Rank:9
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------ACTAGTGC--
GTACTAATTAGTGGCG

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ACTAGTGC-
CTYRAGTGSY