Information for motif33


Reverse Opposite:

p-value:1e-8
log p-value:-1.873e+01
Information Content per bp:1.530
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.05%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets26.2 +/- 12.9bp
Average Position of motif in Background28.6 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTCGAATA---
NNNTTTNTAATACNG

PH0144.1_Pou2f2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTCGAATA---
TNTAATTTGCATANNN

PH0145.1_Pou2f3/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTCGAATA---
TNTAATTTGCATACNA

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTCGAATA-
ATTTGCATAA

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTCGAATA-
ATTTGCATAT

CHR/Cell-Cycle-Exp/Homer

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TTCGAATA
CGGTTTCAAA--

PB0194.1_Zbtb12_2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TTCGAATA---
AGNGTTCTAATGANN

PB0106.1_Arid5a_2/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TTCGAATA-----
TNNTTTCGTATTNNANN

PB0174.1_Sox30_2/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TTCGAATA---
TAAGATTATAATACGG

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTCGAATA-
CCAAAAATAG