Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 4713)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 3214)	% of Background Sequences with Motif
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e-1732	-3.990e+03	0.0000	1206.0	25.59%	13.5	0.42%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e-1732	-3.990e+03	0.0000	1206.0	25.59%	13.5	0.42%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e-1204	-2.774e+03	0.0000	1239.0	26.29%	40.7	1.26%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e-403	-9.293e+02	0.0000	227.0	4.82%	0.0	0.00%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-70	-1.625e+02	0.0000	260.0	5.52%	47.8	1.48%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e-60	-1.398e+02	0.0000	128.0	2.72%	13.0	0.40%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-56	-1.302e+02	0.0000	266.0	5.65%	58.2	1.80%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-56	-1.294e+02	0.0000	249.0	5.28%	52.2	1.62%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-39	-9.053e+01	0.0000	122.0	2.59%	19.3	0.60%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e-37	-8.647e+01	0.0000	87.0	1.85%	11.0	0.34%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-35	-8.256e+01	0.0000	123.0	2.61%	21.1	0.65%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-34	-7.920e+01	0.0000	259.0	5.50%	75.7	2.35%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-31	-7.212e+01	0.0000	75.0	1.59%	9.1	0.28%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-30	-7.026e+01	0.0000	137.0	2.91%	30.0	0.93%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-29	-6.855e+01	0.0000	172.0	3.65%	43.5	1.35%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-28	-6.504e+01	0.0000	151.0	3.20%	36.5	1.13%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e-28	-6.475e+01	0.0000	369.0	7.83%	136.2	4.22%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-26	-6.041e+01	0.0000	190.0	4.03%	54.9	1.70%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-26	-6.037e+01	0.0000	226.0	4.80%	70.5	2.18%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e-23	-5.475e+01	0.0000	206.0	4.37%	64.6	2.00%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-21	-4.873e+01	0.0000	267.0	5.67%	97.3	3.01%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-18	-4.374e+01	0.0000	90.0	1.91%	20.2	0.63%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e-17	-3.991e+01	0.0000	337.0	7.15%	141.4	4.38%
TRa(NR)/C17.2-TRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e-16	-3.858e+01	0.0000	88.0	1.87%	21.9	0.68%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-14	-3.439e+01	0.0000	108.0	2.29%	31.2	0.97%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-14	-3.226e+01	0.0000	101.0	2.14%	29.4	0.91%
NRF1/Promoter/Homer	STGCGCATGCGC	1e-13	-3.100e+01	0.0000	18.0	0.38%	0.0	0.00%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-12	-2.923e+01	0.0000	74.0	1.57%	19.3	0.60%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-12	-2.777e+01	0.0000	194.0	4.12%	77.6	2.40%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e-10	-2.416e+01	0.0000	28.0	0.59%	4.7	0.15%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-9	-2.154e+01	0.0000	115.0	2.44%	42.8	1.33%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e-9	-2.139e+01	0.0000	535.0	11.35%	282.6	8.75%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-8	-1.954e+01	0.0000	52.0	1.10%	14.5	0.45%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-8	-1.930e+01	0.0000	28.0	0.59%	5.7	0.18%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e-8	-1.901e+01	0.0000	13.0	0.28%	0.0	0.00%
BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e-8	-1.853e+01	0.0000	378.0	8.02%	193.4	5.99%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e-7	-1.746e+01	0.0000	154.0	3.27%	66.2	2.05%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-7	-1.739e+01	0.0000	152.0	3.23%	65.5	2.03%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e-7	-1.717e+01	0.0000	108.0	2.29%	43.0	1.33%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e-7	-1.681e+01	0.0000	12.0	0.25%	1.1	0.03%
CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-6	-1.583e+01	0.0000	94.0	1.99%	36.3	1.12%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-6	-1.533e+01	0.0000	25.0	0.53%	5.7	0.18%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e-6	-1.523e+01	0.0000	131.0	2.78%	56.4	1.75%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e-6	-1.471e+01	0.0000	64.0	1.36%	22.8	0.71%
NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e-6	-1.402e+01	0.0000	177.0	3.76%	83.7	2.59%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e-5	-1.289e+01	0.0000	117.0	2.48%	51.9	1.61%
FOXA1:AR/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e-5	-1.265e+01	0.0000	10.0	0.21%	0.5	0.02%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-5	-1.261e+01	0.0000	71.0	1.51%	27.9	0.86%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e-5	-1.205e+01	0.0000	74.0	1.57%	29.6	0.92%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e-5	-1.187e+01	0.0000	147.0	3.12%	69.6	2.15%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-5	-1.170e+01	0.0000	22.0	0.47%	5.7	0.18%
Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e-4	-1.133e+01	0.0001	13.0	0.28%	2.5	0.08%
Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e-4	-1.087e+01	0.0001	118.0	2.50%	54.8	1.70%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e-4	-1.075e+01	0.0001	177.0	3.76%	88.5	2.74%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e-4	-9.815e+00	0.0002	12.0	0.25%	2.9	0.09%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e-4	-9.815e+00	0.0002	12.0	0.25%	2.6	0.08%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-4	-9.558e+00	0.0003	106.0	2.25%	49.8	1.54%
PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e-4	-9.497e+00	0.0003	58.0	1.23%	23.3	0.72%
HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e-3	-9.032e+00	0.0005	31.0	0.66%	10.4	0.32%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-3	-9.003e+00	0.0005	94.0	1.99%	43.0	1.33%
GATA-DR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e-3	-8.873e+00	0.0006	8.0	0.17%	2.0	0.06%
NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer	GGGGGAATCCCC	1e-3	-8.873e+00	0.0006	8.0	0.17%	0.4	0.01%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e-3	-8.730e+00	0.0006	41.0	0.87%	15.4	0.48%
GFY-Staf/Promoters/Homer	RACTACAATTCCCAGAAKGC	1e-3	-8.376e+00	0.0009	11.0	0.23%	3.0	0.09%
Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e-3	-7.647e+00	0.0018	49.0	1.04%	20.6	0.64%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e-3	-7.576e+00	0.0019	27.0	0.57%	9.7	0.30%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e-3	-7.565e+00	0.0019	147.0	3.12%	76.3	2.36%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e-3	-7.232e+00	0.0026	184.0	3.90%	99.9	3.09%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e-3	-7.214e+00	0.0026	677.0	14.37%	413.8	12.81%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e-3	-7.194e+00	0.0026	20.0	0.42%	6.6	0.20%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	MACAGGAAGT	1e-3	-7.165e+00	0.0027	50.0	1.06%	21.1	0.65%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e-3	-7.021e+00	0.0031	10.0	0.21%	2.5	0.08%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e-2	-6.761e+00	0.0039	30.0	0.64%	11.7	0.36%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e-2	-6.757e+00	0.0039	85.0	1.80%	41.8	1.29%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer	TBGCACGCAA	1e-2	-6.580e+00	0.0046	88.0	1.87%	43.1	1.33%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e-2	-6.498e+00	0.0049	45.0	0.96%	19.5	0.60%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e-2	-6.066e+00	0.0074	64.0	1.36%	30.6	0.95%
ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e-2	-5.867e+00	0.0088	14.0	0.30%	4.6	0.14%
GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e-2	-5.867e+00	0.0088	14.0	0.30%	4.6	0.14%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e-2	-5.655e+00	0.0108	109.0	2.31%	57.8	1.79%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e-2	-5.460e+00	0.0129	185.0	3.93%	104.1	3.22%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e-2	-5.441e+00	0.0130	26.0	0.55%	10.0	0.31%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e-2	-5.154e+00	0.0171	104.0	2.21%	55.5	1.72%
c-Myc/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e-2	-5.083e+00	0.0182	65.0	1.38%	32.2	1.00%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-2	-4.937e+00	0.0208	29.0	0.62%	12.5	0.39%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e-2	-4.818e+00	0.0231	15.0	0.32%	5.2	0.16%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e-2	-4.767e+00	0.0241	145.0	3.08%	81.9	2.54%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e-1	-4.586e+00	0.0285	8.0	0.17%	2.3	0.07%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	ATTTTCCATT	1e-1	-4.437e+00	0.0327	75.0	1.59%	39.6	1.23%
n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e-1	-4.349e+00	0.0353	88.0	1.87%	47.8	1.48%
GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e-1	-4.093e+00	0.0451	5.0	0.11%	1.7	0.05%
NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e-1	-4.048e+00	0.0467	14.0	0.30%	5.4	0.17%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-1	-3.951e+00	0.0509	119.0	2.53%	67.9	2.10%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e-1	-3.736e+00	0.0624	102.0	2.16%	57.1	1.77%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e-1	-3.605e+00	0.0704	21.0	0.45%	9.3	0.29%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-1	-3.602e+00	0.0704	37.0	0.79%	18.9	0.58%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e-1	-3.528e+00	0.0745	85.0	1.80%	47.0	1.46%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer	CCATATATGGNM	1e-1	-3.389e+00	0.0847	26.0	0.55%	12.5	0.39%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-1	-3.385e+00	0.0847	15.0	0.32%	6.9	0.21%
bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e-1	-3.322e+00	0.0871	38.0	0.81%	19.9	0.62%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e-1	-3.322e+00	0.0871	38.0	0.81%	19.4	0.60%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e-1	-3.322e+00	0.0871	38.0	0.81%	19.5	0.60%
USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e-1	-3.168e+00	0.1005	46.0	0.98%	24.3	0.75%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e-1	-3.162e+00	0.1005	29.0	0.62%	14.8	0.46%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	GCTGTGGTTW	1e-1	-3.126e+00	0.1028	85.0	1.80%	48.3	1.50%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e-1	-3.077e+00	0.1069	115.0	2.44%	67.7	2.10%
Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-1	-2.848e+00	0.1332	142.0	3.01%	85.4	2.64%
Mouse_Recombination_Hotspot/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e-1	-2.804e+00	0.1354	4.0	0.08%	1.2	0.04%
NF1:FOXA1/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e-1	-2.804e+00	0.1354	4.0	0.08%	0.9	0.03%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e-1	-2.804e+00	0.1354	4.0	0.08%	0.0	0.00%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e-1	-2.709e+00	0.1476	21.0	0.45%	10.3	0.32%
LXRE(NR/DR4)/BLRP(RAW)-LXRb-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e-1	-2.580e+00	0.1665	6.0	0.13%	2.8	0.09%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e-1	-2.568e+00	0.1669	8.0	0.17%	4.0	0.12%
Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e-1	-2.519e+00	0.1738	24.0	0.51%	12.5	0.39%
CHR/Cell-Cycle-Exp/Homer	SRGTTTCAAA	1e-1	-2.455e+00	0.1837	55.0	1.17%	31.3	0.97%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e-1	-2.325e+00	0.2074	40.0	0.85%	22.4	0.69%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-2.256e+00	0.2202	25.0	0.53%	13.1	0.41%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-2.252e+00	0.2202	51.0	1.08%	29.1	0.90%
GRE(NR/IR3)/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-2.116e+00	0.2492	11.0	0.23%	5.5	0.17%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-2.114e+00	0.2492	206.0	4.37%	130.2	4.03%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer	CTGTTTAC	1e0	-2.114e+00	0.2492	206.0	4.37%	130.3	4.03%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-1.992e+00	0.2752	42.0	0.89%	24.9	0.77%
Max(HLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-1.984e+00	0.2752	92.0	1.95%	56.7	1.76%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-1.972e+00	0.2761	53.0	1.12%	31.1	0.96%
TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-1.766e+00	0.3366	5.0	0.11%	3.0	0.09%
PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-1.764e+00	0.3366	83.0	1.76%	51.8	1.61%
GATA-DR8(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-1.710e+00	0.3476	3.0	0.06%	0.8	0.03%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer	GYCATCMATCAT	1e0	-1.710e+00	0.3476	3.0	0.06%	2.0	0.06%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-1.608e+00	0.3819	31.0	0.66%	18.1	0.56%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-1.538e+00	0.4065	26.0	0.55%	15.5	0.48%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-1.533e+00	0.4065	54.0	1.15%	33.4	1.04%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-1.475e+00	0.4263	13.0	0.28%	7.7	0.24%
Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-1.454e+00	0.4320	8.0	0.17%	4.1	0.13%
PAX5-shortForm(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-1.395e+00	0.4548	16.0	0.34%	9.8	0.30%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-1.386e+00	0.4557	226.0	4.80%	149.0	4.61%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-1.360e+00	0.4644	50.0	1.06%	31.4	0.97%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-1.353e+00	0.4644	151.0	3.20%	98.2	3.04%
ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-1.328e+00	0.4724	11.0	0.23%	6.7	0.21%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-1.328e+00	0.4724	62.0	1.32%	39.3	1.22%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-1.287e+00	0.4851	6.0	0.13%	3.7	0.11%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-1.171e+00	0.5407	9.0	0.19%	5.8	0.18%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-1.101e+00	0.5760	68.0	1.44%	44.3	1.37%
NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer	GGAAATTCCC	1e0	-1.096e+00	0.5760	4.0	0.08%	2.1	0.07%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-1.035e+00	0.6067	27.0	0.57%	17.1	0.53%
GATA:SCL/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-1.002e+00	0.6231	7.0	0.15%	4.6	0.14%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-9.580e-01	0.6464	55.0	1.17%	36.1	1.12%
PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-9.510e-01	0.6466	13.0	0.28%	8.9	0.27%
bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-9.356e-01	0.6466	22.0	0.47%	14.8	0.46%
HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-9.356e-01	0.6466	22.0	0.47%	14.3	0.44%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-9.356e-01	0.6466	22.0	0.47%	14.8	0.46%
CTCF-SatelliteElement/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	-8.479e-01	0.6887	2.0	0.04%	1.6	0.05%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	-8.479e-01	0.6887	2.0	0.04%	0.0	0.00%
ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER	AGTTTCASTTTC	1e0	-8.479e-01	0.6887	2.0	0.04%	2.0	0.06%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-8.277e-01	0.6981	54.0	1.15%	36.5	1.13%
Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-8.239e-01	0.6981	17.0	0.36%	11.8	0.37%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-8.096e-01	0.7018	8.0	0.17%	5.8	0.18%
RBPJ:Ebox/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-7.370e-01	0.7498	21.0	0.45%	15.0	0.46%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-6.705e-01	0.7963	9.0	0.19%	6.2	0.19%
c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer	VCCACGTG	1e0	-6.497e-01	0.8080	51.0	1.08%	35.7	1.11%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-6.417e-01	0.8093	64.0	1.36%	44.2	1.37%
GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-6.394e-01	0.8093	6.0	0.13%	4.3	0.13%
PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-6.342e-01	0.8093	32.0	0.68%	22.4	0.69%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-6.210e-01	0.8111	87.0	1.85%	60.6	1.88%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-6.197e-01	0.8111	16.0	0.34%	11.7	0.36%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-6.043e-01	0.8147	26.0	0.55%	18.1	0.56%
Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-5.956e-01	0.8147	13.0	0.28%	9.4	0.29%
Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-5.956e-01	0.8147	13.0	0.28%	9.4	0.29%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-5.858e-01	0.8151	88.0	1.87%	61.3	1.90%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-5.736e-01	0.8203	243.0	5.16%	168.1	5.20%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-5.592e-01	0.8272	53.0	1.12%	37.6	1.16%
GRE/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-5.044e-01	0.8687	21.0	0.45%	15.4	0.48%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-4.934e-01	0.8732	192.0	4.07%	134.9	4.18%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-4.534e-01	0.8984	39.0	0.83%	28.1	0.87%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-4.534e-01	0.8984	39.0	0.83%	29.0	0.90%
Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-4.517e-01	0.8984	4.0	0.08%	3.4	0.10%
VDR(NR/DR3)/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-4.517e-01	0.8984	4.0	0.08%	3.9	0.12%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-4.446e-01	0.8984	29.0	0.62%	21.3	0.66%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-4.360e-01	0.8984	8.0	0.17%	6.2	0.19%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-4.220e-01	0.9011	248.0	5.26%	174.0	5.39%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-4.048e-01	0.9117	441.0	9.36%	308.5	9.55%
ERE(NR/IR3)/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-3.772e-01	0.9320	20.0	0.42%	15.1	0.47%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-3.486e-01	0.9539	17.0	0.36%	13.9	0.43%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-3.110e-01	0.9850	85.0	1.80%	62.2	1.93%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-3.072e-01	0.9850	6.0	0.13%	5.6	0.17%
RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-2.865e-01	0.9985	100.0	2.12%	73.7	2.28%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-2.646e-01	1.0000	1.0	0.02%	1.2	0.04%
CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-2.360e-01	1.0000	61.0	1.29%	46.6	1.44%
HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-2.060e-01	1.0000	37.0	0.79%	29.5	0.91%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-1.924e-01	1.0000	162.0	3.44%	119.6	3.70%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-1.685e-01	1.0000	43.0	0.91%	34.9	1.08%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-1.563e-01	1.0000	24.0	0.51%	20.2	0.63%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-1.454e-01	1.0000	195.0	4.14%	144.2	4.46%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-1.453e-01	1.0000	16.0	0.34%	14.0	0.43%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-1.444e-01	1.0000	233.0	4.94%	171.1	5.30%
MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-1.377e-01	1.0000	126.0	2.67%	95.7	2.96%
ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-1.334e-01	1.0000	303.0	6.43%	221.1	6.85%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-1.289e-01	1.0000	30.0	0.64%	25.4	0.79%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-1.181e-01	1.0000	47.0	1.00%	39.0	1.21%
OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-1.176e-01	1.0000	13.0	0.28%	12.9	0.40%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-1.175e-01	1.0000	85.0	1.80%	66.7	2.07%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-8.328e-02	1.0000	16.0	0.34%	15.8	0.49%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-8.318e-02	1.0000	55.0	1.17%	45.1	1.40%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-8.029e-02	1.0000	75.0	1.59%	60.3	1.87%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-6.976e-02	1.0000	111.0	2.36%	87.7	2.71%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer	CYAAAAATAG	1e0	-6.690e-02	1.0000	23.0	0.49%	21.0	0.65%
STAT6/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-6.676e-02	1.0000	41.0	0.87%	35.0	1.08%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-5.158e-02	1.0000	8.0	0.17%	9.2	0.29%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-4.287e-02	1.0000	75.0	1.59%	62.8	1.94%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-3.955e-02	1.0000	23.0	0.49%	22.7	0.70%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-2.016e-02	1.0000	18.0	0.38%	19.3	0.60%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-1.742e-02	1.0000	51.0	1.08%	46.2	1.43%
E2F(E2F)/Cell-Cycle-Exp/Homer	TTSGCGCGAAAA	1e0	-8.835e-03	1.0000	4.0	0.08%	7.1	0.22%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-8.368e-03	1.0000	252.0	5.35%	199.3	6.17%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-7.276e-03	1.0000	170.0	3.61%	139.7	4.33%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-6.819e-03	1.0000	163.0	3.46%	134.8	4.17%
Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-5.676e-03	1.0000	25.0	0.53%	27.7	0.86%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-5.364e-03	1.0000	138.0	2.93%	116.1	3.59%
BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer	NHAACBGYYV	1e0	-3.588e-03	1.0000	139.0	2.95%	118.3	3.66%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-3.386e-03	1.0000	110.0	2.33%	97.0	3.00%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-2.567e-03	1.0000	46.0	0.98%	46.3	1.43%
FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer	AGGTCANTGACCTB	1e0	-1.434e-03	1.0000	26.0	0.55%	30.8	0.95%
Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-1.434e-03	1.0000	26.0	0.55%	30.7	0.95%
MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-1.369e-03	1.0000	79.0	1.68%	74.1	2.29%
Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-1.253e-03	1.0000	75.0	1.59%	71.1	2.20%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-1.213e-03	1.0000	144.0	3.06%	125.6	3.89%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-1.036e-03	1.0000	72.0	1.53%	69.4	2.15%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-9.830e-04	1.0000	241.0	5.11%	200.0	6.19%
E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-8.950e-04	1.0000	152.0	3.23%	132.3	4.10%
Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-6.960e-04	1.0000	42.0	0.89%	45.9	1.42%
E-box(HLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-4.080e-04	1.0000	2.0	0.04%	7.2	0.22%
Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-3.100e-05	1.0000	100.0	2.12%	99.3	3.08%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-2.000e-05	1.0000	165.0	3.50%	152.8	4.73%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-5.000e-06	1.0000	157.0	3.33%	149.4	4.63%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-2.000e-06	1.0000	149.0	3.16%	145.6	4.51%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-0.000e+00	1.0000	168.0	3.57%	163.6	5.07%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-0.000e+00	1.0000	347.0	7.36%	303.9	9.41%
E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-0.000e+00	1.0000	157.0	3.33%	156.6	4.85%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-0.000e+00	1.0000	414.0	8.79%	358.7	11.11%
Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-0.000e+00	1.0000	303.0	6.43%	282.0	8.73%
SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-0.000e+00	1.0000	594.0	12.61%	527.7	16.34%
EBNA1(EBV virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
Pax7-longest(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	1.5	0.05%
Pax7-long(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	0.0	0.00%	1.4	0.04%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
T1ISRE(IRF)/Ifnb-Exp/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	0.4	0.01%