Information for motif10


Reverse Opposite:

p-value:1e-41
log p-value:-9.643e+01
Information Content per bp:1.643
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif8.50%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets46.5 +/- 29.0bp
Average Position of motif in Background46.9 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CGTRGTGT--
--AGGTGTCA

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CGTRGTGT------
GCGGAGGTGTCGCCTC

MA0009.1_T/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CGTRGTGT---
CTAGGTGTGAA

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CGTRGTGT----
--AGGTGTGAAM

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGTRGTGT-------
TNNNNGGTGTCATNTNT

MA0122.1_Nkx3-2/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGTRGTGT-
TTAAGTGGA

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CGTRGTGT----
--AGGTGTTAAT

MA0027.1_En1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGTRGTGT--
AAGTAGTGCCC

PB0013.1_Eomes_1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGTRGTGT-------
GAAAAGGTGTGAAAATT

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGTRGTGT
NNTGTGGTTT