Information for motif21


Reverse Opposite:

p-value:1e-31
log p-value:-7.317e+01
Information Content per bp:1.662
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif8.14%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets51.8 +/- 21.4bp
Average Position of motif in Background42.4 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCCCAGASCCCM
GGCCCCGCCCCC-

MA0079.3_SP1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCCAGASCCCM
GCCCCGCCCCC-

MA0516.1_SP2/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCCAGASCCCM---
GCCCCGCCCCCTCCC

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCCCAGASCCCM
NAGCCCCGCCCCCN

MA0597.1_THAP1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCCCAGASCCCM
CTGCCCGCA-----

PB0097.1_Zfp281_1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCCAGASCCCM--
TCCCCCCCCCCCCCC

PB0025.1_Glis2_1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCCCAGASCCCM-----
-TATCGACCCCCCACAG

MA0599.1_KLF5/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCCCAGASCCCM
GCCCCGCCCC--

MA0162.2_EGR1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCCCAGASCCCM--
CCCCCGCCCCCGCC

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCCCAGASCCCM----
TGTCGTGACCCCTTAAT