Information for motif22


Reverse Opposite:

p-value:1e-31
log p-value:-7.317e+01
Information Content per bp:1.641
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif8.14%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.95%
Average Position of motif in Targets53.2 +/- 31.1bp
Average Position of motif in Background43.8 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0461.1_Atoh1/Jaspar

Match Rank:1
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AGACAGCCAGCT-
-----GCCATCTG

GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGACAGCCAGCT--
NAGATWNBNATCTNN

MA0498.1_Meis1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGACAGCCAGCT
NNNTGAGTGACAGCT

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AGACAGCCAGCT--
----NNACAGCTGC

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AGACAGCCAGCT--
----NAHCAGCTGD

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGACAGCCAGCT
CCAGACAG------

MA0522.1_Tcf3/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AGACAGCCAGCT----
-----CACAGCTGCAG

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AGACAGCCAGCT---
-----GCCATCTGTT

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AGACAGCCAGCT-----
-----GCCAGCTGBTNB

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGACAGCCAGCT----
GATATTGACAGCTGCGT