Information for motif25


Reverse Opposite:

p-value:1e-27
log p-value:-6.389e+01
Information Content per bp:1.761
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif5.13%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets51.7 +/- 24.9bp
Average Position of motif in Background40.8 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0493.1_Klf1/Jaspar

Match Rank:1
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:AGCTGGGTGAGG--
---TGGGTGTGGCN

MA0039.2_Klf4/Jaspar

Match Rank:2
Score:0.73
Offset:3
Orientation:forward strand
Alignment:AGCTGGGTGAGG-
---TGGGTGGGGC

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.73
Offset:2
Orientation:forward strand
Alignment:AGCTGGGTGAGG--
--NTGGGTGTGGCC

MA0599.1_KLF5/Jaspar

Match Rank:4
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:AGCTGGGTGAGG-
---GGGGNGGGGC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.71
Offset:3
Orientation:forward strand
Alignment:AGCTGGGTGAGG-
---DGGGYGKGGC

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:AGCTGGGTGAGG-
---TGGGTGTGGC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.65
Offset:4
Orientation:forward strand
Alignment:AGCTGGGTGAGG
----GGGGGGGG

PB0107.1_Ascl2_2/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGCTGGGTGAGG----
NATNGGGNGGGGANAN

PB0167.1_Sox13_2/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGCTGGGTGAGG----
GTATTGGGTGGGTAATT

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGCTGGGTGAGG----
NNAGGGGCGGGGTNNA