Information for motif27


Reverse Opposite:

p-value:1e-26
log p-value:-6.079e+01
Information Content per bp:1.715
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif4.96%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets54.5 +/- 28.0bp
Average Position of motif in Background57.8 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TTCTNGCC--
TTCCCGCCWG

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TTCTNGCC-
VDTTTCCCGCCA

MA0470.1_E2F4/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTCTNGCC-
NNTTCCCGCCC

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTCTNGCC--
NNACTTGCCTT

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTCTNGCC
DTTTCCCGCC

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTCTNGCC
NYTTCCCGCC

MA0471.1_E2F6/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTCTNGCC-
NCTTCCCGCCC

MA0024.2_E2F1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTCTNGCC--
CCTCCCGCCCN

MA0469.1_E2F3/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTCTNGCC-------
CTCCCGCCCCCACTC

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTCTNGCC
CTGTCTGG--