Information for motif3


Reverse Opposite:

p-value:1e-73
log p-value:-1.698e+02
Information Content per bp:1.546
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif10.44%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.6 +/- 24.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.34
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0506.1_NRF1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CGCGCCGGCG-
TGCGCAGGCGC

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGCGCCGGCG---
-GCGCATGCGCAG

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CGCGCCGGCG
AGCGCGCC----

NRF1/Promoter/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGCGCCGGCG-
GTGCGCATGCGC

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGCGCCGGCG--
ANTGCGGGGGCGGN

MA0162.2_EGR1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGCGCCGGCG----
GGCGGGGGCGGGGG

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGCGCCGGCG--
NGCGTGGGCGGR

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CGCGCCGGCG
DTTTCCCGCC----

PB0008.1_E2F2_1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CGCGCCGGCG-
NTCGCGCGCCTTNNN

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGCGCCGGCG
-GCTCCG---