Information for motif31


Reverse Opposite:

p-value:1e-23
log p-value:-5.397e+01
Information Content per bp:1.603
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif10.27%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif2.08%
Average Position of motif in Targets40.4 +/- 27.7bp
Average Position of motif in Background41.2 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0036.1_Irf6_1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTAGGTMTCK-----
NNNTTGGTTTCGNTNNN

PB0034.1_Irf4_1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTAGGTMTCK-----
TNTGGTTTCGATACN

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTAGGTMTCK--
--TGGTTTCAGT

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTAGGTMTCK
CTGTGGTTTN-

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTAGGTMTCK----
GCGGAGGTGTCGCCTC

MA0002.2_RUNX1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTAGGTMTCK
GTCTGTGGTTT--

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTAGGTMTCK
NNTGTGGTTT--

PB0035.1_Irf5_1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTAGGTMTCK------
-NTGGTTTCGGTTNNN

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TTAGGTMTCK
NNHTGTGGTTWN-

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTAGGTMTCK
GCTGTGGTTT--