Information for motif33


Reverse Opposite:

p-value:1e-20
log p-value:-4.749e+01
Information Content per bp:1.626
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif5.31%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets48.8 +/- 24.1bp
Average Position of motif in Background53.1 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:1
Score:0.89
Offset:-7
Orientation:reverse strand
Alignment:-------TCACGTGA-------
NTNNTNGTCACGTGACNNNTNC

E-box(HLH)/Promoter/Homer

Match Rank:2
Score:0.88
Offset:-4
Orientation:forward strand
Alignment:----TCACGTGA
CCGGTCACGTGA

USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--TCACGTGA
GGTCACGTGA

Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:4
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-TCACGTGA-
GTCACGTGGT

bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.85
Offset:0
Orientation:forward strand
Alignment:TCACGTGA--
KCACGTGMCN

MA0093.2_USF1/Jaspar

Match Rank:6
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--TCACGTGA-
GGTCACGTGGC

MA0526.1_USF2/Jaspar

Match Rank:7
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-TCACGTGA--
GTCATGTGACC

CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-TCACGTGA
GHCACGTG-

BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-TCACGTGA
GNCACGTG-

MA0464.1_Bhlhe40/Jaspar

Match Rank:10
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-TCACGTGA--
CTCACGTGCAC