Information for motif34


Reverse Opposite:

p-value:1e-19
log p-value:-4.590e+01
Information Content per bp:1.708
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif4.07%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets41.6 +/- 24.0bp
Average Position of motif in Background30.8 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGAGATRACAGC
GGTGYTGACAGS

PB0021.1_Gata3_1/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----AGAGATRACAGC-----
TTTTTAGAGATAAGAAATAAAG

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AGAGATRACAGC
--AGATAASR--

MA0036.2_GATA2/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGAGATRACAGC--
NCAGATAAGAANNN

PB0023.1_Gata6_1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGAGATRACAGC--
TATAGAGATAAGAATTG

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGAGATRACAGC
NBWGATAAGR--

MA0035.3_Gata1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGAGATRACAGC
ANAGATAAGAA-

MA0482.1_Gata4/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGAGATRACAGC
NNGAGATAAGA--

PB0126.1_Gata5_2/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGAGATRACAGC--
GACAGAGATATCAGTGT

MA0037.2_GATA3/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGAGATRACAGC
--AGATAAGA--