Information for motif36


Reverse Opposite:

p-value:1e-17
log p-value:-4.024e+01
Information Content per bp:1.741
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif3.72%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.6 +/- 22.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0103.2_ZEB1/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GCCACACCTGGW
-CCTCACCTG--

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GCCACACCTGGW
GCCACACCCA--

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GCCACACCTGGW
GGCCACACCCAN-

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GCCACACCTGGW
GCCMCRCCCH--

MA0493.1_Klf1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GCCACACCTGGW
GGCCACACCCA--

MA0039.2_Klf4/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCCACACCTGGW
GCCCCACCCA--

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GCCACACCTGGW
--NNCACCTGNN

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCCACACCTGGW
ATGCCAGACN----

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCCACACCTGGW
NNGGCCACGCCTTTN

PB0117.1_Eomes_2/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCCACACCTGGW-
NNGGCGACACCTCNNN