Information for motif41


Reverse Opposite:

p-value:1e-7
log p-value:-1.782e+01
Information Content per bp:1.619
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif4.07%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif1.19%
Average Position of motif in Targets50.7 +/- 31.3bp
Average Position of motif in Background64.1 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0143.1_Klf7_2/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----TTCGCCTA----
AAGCATACGCCCAACTT

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TTCGCCTA--
NNGGCCACGCCTTTN

PB0094.1_Zfp128_1/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------TTCGCCTA---
TTNGGGTACGCCNNANN

MA0057.1_MZF1_5-13/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTCGCCTA-
TTCCCCCTAC

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTCGCCTA----
YCCGCCCACGCN

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTCGCCTA-
-AGGCCTAG

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTCGCCTA
AGCGCGCC--

PB0128.1_Gcm1_2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTCGCCTA------
NTCNTCCCCTATNNGNN

MA0161.1_NFIC/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TTCGCCTA
--TGCCAA

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TTCGCCTA----
TACGCCCCGCCACTCTG