Information for motif6


Reverse Opposite:

p-value:1e-60
log p-value:-1.395e+02
Information Content per bp:1.691
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif9.03%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets52.1 +/- 24.0bp
Average Position of motif in Background48.7 +/- 5.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0527.1_ZBTB33/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AAGCCGCGAG--
NAGNTCTCGCGAGAN

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAGCCGCGAG--
ATAAAGGCGCGCGAT

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AAGCCGCGAG--
ATAAGGGCGCGCGAT

PB0147.1_Max_2/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAGCCGCGAG----
NNGTCGCGTGNCAC

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAGCCGCGAG----
NNNACCGAGAGTNNN

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAGCCGCGAG
CAGCC-----

MA0024.2_E2F1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAGCCGCGAG-
CGGGCGGGAGG

MA0104.3_Mycn/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AAGCCGCGAG
--GCCACGTG

c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AAGCCGCGAG
--NCCACGTG

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AAGCCGCGAG-
-ANCCGGAAGT