Information for motif8


Reverse Opposite:

p-value:1e-52
log p-value:-1.215e+02
Information Content per bp:1.446
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif11.33%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.94%
Average Position of motif in Targets52.6 +/- 24.1bp
Average Position of motif in Background52.7 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--NGTGGTTYBN
NNTGTGGTTT--

MA0002.2_RUNX1/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---NGTGGTTYBN
GTCTGTGGTTT--

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---NGTGGTTYBN
NNHTGTGGTTWN-

MA0511.1_RUNX2/Jaspar

Match Rank:4
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------NGTGGTTYBN
GGGGTTTGTGGTTTG-

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-NGTGGTTYBN
CTGTGGTTTN-

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:6
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--NGTGGTTYBN
GCTGTGGTTT--

MA0130.1_ZNF354C/Jaspar

Match Rank:7
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:NGTGGTTYBN
-GTGGAT---

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----NGTGGTTYBN--
NNANTGGTGGTCTTNNN

POL002.1_INR/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---NGTGGTTYBN
NNNANTGA-----

Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:NGTGGTTYBN---
-GTGGCGTGACNG