Information for motif12


Reverse Opposite:

p-value:1e-59
log p-value:-1.362e+02
Information Content per bp:1.711
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets23.6 +/- 12.9bp
Average Position of motif in Background16.8 +/- 7.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AATGATACTGTC-
TATAATTATAATATTC

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AATGATACTGTC---
TNNTGCTACTGTNNNN

PB0064.1_Sox14_1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AATGATACTGTC-
GCTAATTATAATTATC

PB0051.1_Osr2_1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AATGATACTGTC---
CNNNGCTACTGTANNN

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AATGATACTGTC
AATAATT-----

PH0161.1_Six1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AATGATACTGTC--
ANNNATGATACCCCATC

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AATGATACTGTC
CATGAC------

PB0069.1_Sox21_1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AATGATACTGTC-
NNTAATTATAATNANN

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AATGATACTGTC--
AGATGCTRCTRCCHT

GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AATGATACTGTC-------
NDBAGATRWTATCTVNNNNN