Information for motif13


Reverse Opposite:

p-value:1e-48
log p-value:-1.125e+02
Information Content per bp:1.769
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets25.3 +/- 10.7bp
Average Position of motif in Background28.4 +/- 9.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0042.1_Mafk_1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GAAACAATGCTG----
-TAAAAATGCTGACTT

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GAAACAATGCTG-----
--AAAWWTGCTGACWWD

MA0515.1_Sox6/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GAAACAATGCTG
AAAACAATGG--

MA0495.1_MAFF/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GAAACAATGCTG-------
-NAAAANTGCTGACTCAGC

MA0087.1_Sox5/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GAAACAATGCTG
-NAACAAT----

MA0496.1_MAFK/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GAAACAATGCTG------
---AAANTGCTGACTNAG

MA0084.1_SRY/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAAACAATGCTG
GTAAACAAT----

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:GAAACAATGCTG
-------NGCTN

MA0077.1_SOX9/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAAACAATGCTG
-GAACAATGG--

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAAACAATGCTG
--AACAAT----