Information for motif16


Reverse Opposite:

p-value:1e-44
log p-value:-1.035e+02
Information Content per bp:1.610
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif0.18%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets24.6 +/- 10.1bp
Average Position of motif in Background12.2 +/- 8.7bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ATCATACAGAGG---
AAACAGACAAAGGAAT

MA0514.1_Sox3/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ATCATACAGAGG
--AAAACAAAGG

Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ATCATACAGAGG
ATTTGCATACAATGG

MA0143.3_Sox2/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:ATCATACAGAGG
----AACAAAGG

PH0152.1_Pou6f1_2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ATCATACAGAGG----
AAACATAATGAGGTTGC

MA0159.1_RXR::RAR_DR5/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATCATACAGAGG---
AGGTCACGGAGAGGTCA

MA0442.1_SOX10/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:ATCATACAGAGG
-----ACAAAG-

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATCATACAGAGG---
CTCACACAATGGCGC

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:ATCATACAGAGG
----RACAAWGG

bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---ATCATACAGAGG---
WNAGTCADAVTGAAACTN