Information for motif17


Reverse Opposite:

p-value:1e-37
log p-value:-8.735e+01
Information Content per bp:1.569
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets26.5 +/- 10.1bp
Average Position of motif in Background22.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.49
Offset:-7
Orientation:reverse strand
Alignment:-------CAGTGGTAGATATAGTGAAG
NNNNTGCCAGTGATTG-----------

PB0096.1_Zfp187_1/Jaspar

Match Rank:2
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-CAGTGGTAGATATAGTGAAG
TTATTAGTACATAN-------

PB0005.1_Bbx_1/Jaspar

Match Rank:3
Score:0.47
Offset:7
Orientation:forward strand
Alignment:CAGTGGTAGATATAGTGAAG--
-------TAATTCAATGAAGTG

Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.47
Offset:0
Orientation:forward strand
Alignment:CAGTGGTAGATATAGTGAAG
AGGTGHCAGACA--------

MA0122.1_Nkx3-2/Jaspar

Match Rank:5
Score:0.46
Offset:-2
Orientation:forward strand
Alignment:--CAGTGGTAGATATAGTGAAG
TTAAGTGGA-------------

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.45
Offset:15
Orientation:reverse strand
Alignment:CAGTGGTAGATATAGTGAAG-
---------------NGAAGC

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.44
Offset:-2
Orientation:reverse strand
Alignment:--CAGTGGTAGATATAGTGAAG
NNHTGTGGTTWN----------

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:8
Score:0.44
Offset:-1
Orientation:forward strand
Alignment:-CAGTGGTAGATATAGTGAAG
GCTGTGGTTT-----------

PB0197.1_Zfp105_2/Jaspar

Match Rank:9
Score:0.44
Offset:6
Orientation:reverse strand
Alignment:CAGTGGTAGATATAGTGAAG---
------NAAANTTATTGAANCAN

GFY(?)/Promoter/Homer

Match Rank:10
Score:0.44
Offset:4
Orientation:reverse strand
Alignment:CAGTGGTAGATATAGTGAAG
----GGGAATTGTAGT----