Information for motif21


Reverse Opposite:

p-value:1e-31
log p-value:-7.157e+01
Information Content per bp:1.738
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets24.4 +/- 11.3bp
Average Position of motif in Background18.5 +/- 2.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCAATKGAGA-----
GNNACCGAGAATNNN

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCAATKGAGA-----
TTGACCGAGAATTCC

PB0132.1_Hbp1_2/Jaspar

Match Rank:3
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GCAATKGAGA--
NNTNNACAATGGGANNN

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCAATKGAGA-----
NNNACCGAGAGTNNN

PH0063.1_Hoxb8/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCAATKGAGA--
ACCGGCAATTAATAAA

MA0077.1_SOX9/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCAATKGAGA
GAACAATGG---

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCAATKGAGA--
--AATGGAAAAT

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GCAATKGAGA
NGTTGCCATGGCAA

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCAATKGAGA
TTATGCAAT-----

MA0056.1_MZF1_1-4/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GCAATKGAGA
----TGGGGA