Information for motif23


Reverse Opposite:

p-value:1e-28
log p-value:-6.609e+01
Information Content per bp:1.703
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets23.1 +/- 10.9bp
Average Position of motif in Background36.7 +/- 2.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0040.1_Foxq1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGACTGTTTCTA
-TATTGTTTATT

PB0045.1_Myb_1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGACTGTTTCTA-
NNNNTAACGGTTNNNAN

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGACTGTTTCTA---
---CTGTTGCTAGGS

MA0100.2_Myb/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGACTGTTTCTA
TGGCAGTTGN--

MA0157.1_FOXO3/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TGACTGTTTCTA
----TGTTTACA

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGACTGTTTCTA
BRRCVGTTDN--

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TGACTGTTTCTA
---CTGTTTAC-

PB0046.1_Mybl1_1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TGACTGTTTCTA-
NNANTAACGGTTNNNAN

MA0087.1_Sox5/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGACTGTTTCTA
--ATTGTTA---

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGACTGTTTCTA
TGTCGGTT----