Information for motif26


Reverse Opposite:

p-value:1e-26
log p-value:-6.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets27.9 +/- 10.8bp
Average Position of motif in Background23.6 +/- 6.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0175.1_Sox4_2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGTTAAATTGTA-----
GGAAAAATTGTTAGGAA

PB0066.1_Sox17_1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGTTAAATTGTA---
NNATNAATTGTTTNN

PB0165.1_Sox11_2/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AGTTAAATTGTA-----
---AAAATTGTTATGAA

MA0153.1_HNF1B/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGTTAAATTGTA-
-GTTAAATATTAA

PB0081.1_Tcf1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AGTTAAATTGTA
NNNTTAGTTAACTNANN

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGTTAAATTGTA------
--TTCAATTGTTCTAAAA

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGTTAAATTGTA-
GGTTAAACATTAA

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGTTAAATTGTA----
ANNTCCATTGTTCNNN

PB0074.1_Sox8_1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGTTAAATTGTA-----
GTATCTATTGTTCTTTA

PB0073.1_Sox7_1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGTTAAATTGTA-------
TNNANNTCTATTGTTNTNNANN