Information for motif29


Reverse Opposite:

p-value:1e-18
log p-value:-4.215e+01
Information Content per bp:1.799
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets23.8 +/- 11.1bp
Average Position of motif in Background33.6 +/- 8.3bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0024.2_E2F1/Jaspar

Match Rank:1
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:YCTCGCGC---
CCTCCCGCCCN

MA0470.1_E2F4/Jaspar

Match Rank:2
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-YCTCGCGC--
NNTTCCCGCCC

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:3
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--YCTCGCGC--
VDTTTCCCGCCA

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-YCTCGCGC-
NYTTCCCGCC

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-YCTCGCGC-
DTTTCCCGCC

E2F(E2F)/Cell-Cycle-Exp/Homer

Match Rank:6
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-YCTCGCGC---
TTTTCGCGCGAA

MA0471.1_E2F6/Jaspar

Match Rank:7
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-YCTCGCGC--
NCTTCCCGCCC

MA0527.1_ZBTB33/Jaspar

Match Rank:8
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-YCTCGCGC------
CTCTCGCGAGATCTG

MA0469.1_E2F3/Jaspar

Match Rank:9
Score:0.71
Offset:1
Orientation:forward strand
Alignment:YCTCGCGC--------
-CTCCCGCCCCCACTC

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:YCTCGCGC---
-TTCCCGCCWG