Information for motif30


Reverse Opposite:

p-value:1e-17
log p-value:-4.128e+01
Information Content per bp:1.578
Number of Target Sequences with motif10436.0
Percentage of Target Sequences with motif33.72%
Number of Background Sequences with motif7987.6
Percentage of Background Sequences with motif31.40%
Average Position of motif in Targets25.0 +/- 9.3bp
Average Position of motif in Background24.9 +/- 8.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AAAAAAAAAAAAAAAAAAAA
-GTTAAAAAAAAAAATTA--

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAAAAAAAAAAAAAAAAAAA
TACTGGAAAAAAAA------

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AAAAAAAAAAAAAAAAAAAA
---AACAAACAACAAGAG--

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AAAAAAAAAAAAAAAAAAAA
--AAATAAGAAAAAAC----

MA0481.1_FOXP1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAAAAAAAAAAAAAAAAAAA
CAAAAGTAAACAAAG-----

PB0116.1_Elf3_2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAAAAAAAAAAAAAAAAAAA
GTTCAAAAAAAAAATTC---

FOXA1:AR/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAAAAAAAAAAAAAAAAAAA--
--AGTAAACAAAAAAGAACANN

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AAAAAAAAAAAAAAAAAAAA
NNCCTGNAAAAAAAAAAAAA----

MA0041.1_Foxd3/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:AAAAAAAAAAAAAAAAAAAA
------AAACAAACATTC--

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AAAAAAAAAAAAAAAAAAAA
NNCCTGNAAAAAAAAAAAAA----