Information for motif31


Reverse Opposite:

p-value:1e-17
log p-value:-3.935e+01
Information Content per bp:1.530
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets25.8 +/- 12.5bp
Average Position of motif in Background26.4 +/- 3.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGTCAAGACATT---
CAAATCCAGACATCACA

PB0041.1_Mafb_1/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGTCAAGACATT-
NCTANGTCAGCAAATTT

PB0042.1_Mafk_1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGTCAAGACATT--
AAGTCAGCANTTTTN

MA0029.1_Mecom/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGTCAAGACATT-
AAGATAAGATAACA

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGTCAAGACATT
---CCAGACAG-

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGTCAAGACATT---
AACACCAAAACAAAGGA

MA0496.1_MAFK/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGTCAAGACATT
CTGAGTCAGCAATTT

MA0106.2_TP53/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGTCAAGACATT
ACATGCCCAGACATG

MA0047.2_Foxa2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----AGTCAAGACATT
NCTAAGTAAACA----

MA0596.1_SREBF2/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGTCAAGACATT
-ATCACCCCAT-