Information for motif5


Reverse Opposite:

p-value:1e-105
log p-value:-2.430e+02
Information Content per bp:1.736
Number of Target Sequences with motif262.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif38.9
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets24.9 +/- 12.7bp
Average Position of motif in Background19.9 +/- 14.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0108.1_Atf1_2/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GTGACGAA----
GAATGACGAATAAC

PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:2
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GTGACGAA----
ACCGTGACTAATTNN

MA0067.1_Pax2/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GTGACGAA
NCGTGACN--

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTGACGAA
CATGAC---

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTGACGAA
-TGACGT-

PB0159.1_Rfx4_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTGACGAA----
NNNGTAACTANGNNA

PB0158.1_Rfx3_2/Jaspar

Match Rank:7
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------GTGACGAA--------
NNTNGNNGTAACCAAGNNNNAGN

MA0490.1_JUNB/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTGACGAA-
GGATGACTCAT

PAX5-shortForm(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.59
Offset:-9
Orientation:reverse strand
Alignment:---------GTGACGAA
TCAGNGAGCGTGAC---

MA0477.1_FOSL1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTGACGAA--
GGTGACTCATG