Information for motif6


Reverse Opposite:

p-value:1e-98
log p-value:-2.272e+02
Information Content per bp:1.732
Number of Target Sequences with motif460.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif117.4
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets24.8 +/- 11.6bp
Average Position of motif in Background23.4 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:1
Score:0.74
Offset:-7
Orientation:reverse strand
Alignment:-------GCMAAACCGGTT-
VAAACYKGTHWAACMRGTTT

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCMAAACCGGTT------
-GAAAACTAGTTAACATC

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCMAAACCGGTT
--NHAACBGYYV

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCMAAACCGGTT----------
--NAAACCGGTTNNAACCGGTT

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GCMAAACCGGTT
----AACCGANA

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCMAAACCGGTT
ACTGAAACCA---

PB0141.1_Isgf3g_2/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCMAAACCGGTT--
GCAAAACATTACTA

PB0046.1_Mybl1_1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GCMAAACCGGTT----
TTGAAAACCGTTAATTT

PH0006.1_Barhl2/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GCMAAACCGGTT-----
-AAAAACCAATTAAGAA

PH0086.1_Irx5/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GCMAAACCGGTT----
ANTNNTACATGTANNTN