Information for motif7


Reverse Opposite:

p-value:1e-96
log p-value:-2.211e+02
Information Content per bp:1.695
Number of Target Sequences with motif464.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif121.9
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets25.4 +/- 11.7bp
Average Position of motif in Background25.4 +/- 12.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.98
Offset:0
Orientation:forward strand
Alignment:VWAACCACARDN
NAAACCACAG--

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.98
Offset:0
Orientation:forward strand
Alignment:VWAACCACARDN
NWAACCACADNN

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:3
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:VWAACCACARDN
-AAACCACAGC-

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.97
Offset:1
Orientation:forward strand
Alignment:VWAACCACARDN
-AAACCACANN-

MA0002.2_RUNX1/Jaspar

Match Rank:5
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:VWAACCACARDN
-AAACCACAGAN

MA0511.1_RUNX2/Jaspar

Match Rank:6
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:VWAACCACARDN---
CAAACCACAAACCCC

MA0130.1_ZNF354C/Jaspar

Match Rank:7
Score:0.73
Offset:2
Orientation:forward strand
Alignment:VWAACCACARDN
--ATCCAC----

MA0479.1_FOXH1/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--VWAACCACARDN
TCCAATCCACA---

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-VWAACCACARDN
SSAATCCACANN-

MA0483.1_Gfi1b/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:VWAACCACARDN
-AAATCACAGCA