Information for motif9


Reverse Opposite:

p-value:1e-62
log p-value:-1.442e+02
Information Content per bp:1.564
Number of Target Sequences with motif62.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets24.3 +/- 11.0bp
Average Position of motif in Background20.7 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CACAGCTATTTG----
----KCTATTTTTRGH

MA0042.1_FOXI1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CACAGCTATTTG---
---GGATGTTTGTTT

MA0497.1_MEF2C/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CACAGCTATTTG------
---TTCTATTTTTAGNNN

PH0094.1_Lhx4/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CACAGCTATTTG-----
CAAAGCTAATTAGNTTN

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CACAGCTATTTG---
-----CTATTTTTGG

PH0024.1_Dlx5/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CACAGCTATTTG----
NANNGNTAATTACCNN

PH0074.1_Hoxd1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CACAGCTATTTG-----
NNNAGCTAATTAGCTTA

MA0052.2_MEF2A/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CACAGCTATTTG-----
--NNGCTATTTTTAGCN

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CACAGCTATTTG
-ACAGCTGTTV-

PH0098.1_Lhx8/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CACAGCTATTTG-----
CACCGCTAATTAGNNGN