Information for motif13


Reverse Opposite:

p-value:1e-47
log p-value:-1.096e+02
Information Content per bp:1.545
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif4.39%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets49.6 +/- 23.5bp
Average Position of motif in Background58.3 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGAACHNCAA--
GAAASYGAAASY

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TGAACHNCAA
--AACCGANA

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGAACHNCAA-
-AAACCACANN

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGAACHNCAA-
CGGAAGTGAAAC

PB0033.1_Irf3_1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGAACHNCAA---
GAGAACCGAAACTG

T1ISRE(IRF)/Ifnb-Exp/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGAACHNCAA--
AGAAACGAAAGT

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGAACHNCAA
NAAACCACAG

MA0002.2_RUNX1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGAACHNCAA--
-AAACCACAGAN

MA0133.1_BRCA1/Jaspar

Match Rank:9
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TGAACHNCAA---
------ACAACAC

MA0523.1_TCF7L2/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGAACHNCAA-----
-AAAGATCAAAGGAA