Information for motif16


Reverse Opposite:

p-value:1e-39
log p-value:-9.067e+01
Information Content per bp:1.530
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif3.84%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets53.5 +/- 27.6bp
Average Position of motif in Background47.8 +/- 11.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CGTCAAGC
ACGTCA---

MA0067.1_Pax2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CGTCAAGC
AGTCACGC

MA0018.2_CREB1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CGTCAAGC
TGACGTCA---

MA0164.1_Nr2e3/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CGTCAAGC--
---CAAGCTT

PB0108.1_Atf1_2/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CGTCAAGC
NTTATTCGTCATNC

PAX5-shortForm(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGTCAAGC-------
-GTCACGCTCNCTGA

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGTCAAGC
-GTCATN-

MA0070.1_PBX1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGTCAAGC---
CCATCAATCAAA

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGTCAAGC-
---CACGCA

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CGTCAAGC-
----CAGCC