Information for motif17


Reverse Opposite:

p-value:1e-37
log p-value:-8.585e+01
Information Content per bp:1.681
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif4.66%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets52.1 +/- 26.1bp
Average Position of motif in Background60.9 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--GTTTCACAATGA----
NAGTTTCABTHTGACTNW

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCACAATGA
TGGTTTCAGT----

CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTTTCACAATGA
GTTGCGCAAT--

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTTTCACAATGA
AGTTTCAGTTTC-

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTTTCACAATGA
ACTTTCACTTTC-

MA0050.2_IRF1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GTTTCACAATGA----
TTTTACTTTCACTTTCACTTT

MA0043.1_HLF/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTTTCACAATGA
GGTTACGCAATA-

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTTTCACAATGA
ACTTTCACTTTC-

PB0034.1_Irf4_1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GTTTCACAATGA
TNTGGTTTCGATACN-

MA0102.3_CEBPA/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTTTCACAATGA
ATTGCACAATA-