Information for motif18


Reverse Opposite:

p-value:1e-33
log p-value:-7.819e+01
Information Content per bp:1.439
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif4.39%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets47.9 +/- 24.0bp
Average Position of motif in Background40.1 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0039.2_Klf4/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TGTGGCTGGGGC
--TGGGTGGGGC

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TGTGGCTGGGGC
--TGGGTGTGGC

MA0599.1_KLF5/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TGTGGCTGGGGC
--GGGGNGGGGC

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TGTGGCTGGGGC-
-NTGGGTGTGGCC

MA0493.1_Klf1/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TGTGGCTGGGGC-
--TGGGTGTGGCN

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TGTGGCTGGGGC
--DGGGYGKGGC

MA0155.1_INSM1/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TGTGGCTGGGGC--
--TGTCAGGGGGCG

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TGTGGCTGGGGC
---GGGGGGGG-

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGTGGCTGGGGC
-TWGTCTGV---

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGTGGCTGGGGC--
NAGANTGGCGGGGNGNA