Information for motif20


Reverse Opposite:

p-value:1e-31
log p-value:-7.148e+01
Information Content per bp:1.744
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif4.84%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets44.9 +/- 26.2bp
Average Position of motif in Background47.4 +/- 18.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0079.3_SP1/Jaspar

Match Rank:1
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:GGAGGMGGRG-
GGGGGCGGGGC

MA0516.1_SP2/Jaspar

Match Rank:2
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----GGAGGMGGRG-
GGGNGGGGGCGGGGC

MA0162.2_EGR1/Jaspar

Match Rank:3
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GGAGGMGGRG-
GGCGGGGGCGGGGG

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GGAGGMGGRG---
AGGGGGCGGGGCTG

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GGAGGMGGRG--
GGGGGCGGGGCC

MA0528.1_ZNF263/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGAGGMGGRG-----------
GGAGGAGGAGGGGGAGGAGGA

MA0599.1_KLF5/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GGAGGMGGRG-
-GGGGNGGGGC

PB0097.1_Zfp281_1/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GGAGGMGGRG--
GGGGGGGGGGGGGGA

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GGAGGMGGRG----
NAGANTGGCGGGGNGNA

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGAGGMGGRG
GGGGGGGG--