Information for motif25


Reverse Opposite:

p-value:1e-27
log p-value:-6.347e+01
Information Content per bp:1.755
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif3.84%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets47.0 +/- 24.1bp
Average Position of motif in Background51.5 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AMACAGCTTT
BAACAGCTGT

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AMACAGCTTT
-AACAGCTG-

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AMACAGCTTT
-CACAGN---

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AMACAGCTTT
NAHCAGCTGD

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AMACAGCTTT
NAACAGCTGT

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AMACAGCTTT---
-AGCAGCTGCTNN

MA0521.1_Tcf12/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AMACAGCTTT--
-AACAGCTGCAG

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AMACAGCTTT
NNACAGCTGC

MA0442.1_SOX10/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AMACAGCTTT
ACAAAG----

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AMACAGCTTT
CAGCAGCTGN