Information for motif29


Reverse Opposite:

p-value:1e-21
log p-value:-4.963e+01
Information Content per bp:1.777
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif3.29%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets45.2 +/- 20.7bp
Average Position of motif in Background43.8 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0079.3_SP1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AAAGGGGAGG---
--GGGGGCGGGGC

PB0110.1_Bcl6b_2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AAAGGGGAGG----
NNTNAGGGGCGGNNNN

PB0128.1_Gcm1_2/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AAAGGGGAGG--
TGCGCATAGGGGAGGAG

MA0080.3_Spi1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AAAGGGGAGG---
AAAAAGAGGAAGTGA

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AAAGGGGAGG-----
-AGGGGGCGGGGCTG

MA0516.1_SP2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AAAGGGGAGG---
GGGNGGGGGCGGGGC

PB0202.1_Zfp410_2/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AAAGGGGAGG-----
NNTNNGGGGCGGNGNGN

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AAAGGGGAGG----
NNNAAGGGGGCGGGNNN

MA0056.1_MZF1_1-4/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AAAGGGGAGG
--TGGGGA--

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AAAGGGGAGG----
----GGGAGGACNG