Information for motif3


Reverse Opposite:

p-value:1e-95
log p-value:-2.195e+02
Information Content per bp:1.701
Number of Target Sequences with motif109.0
Percentage of Target Sequences with motif9.96%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets46.7 +/- 28.4bp
Average Position of motif in Background64.8 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CCGGGGCT
-CGGAGC-

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CCGGGGCT-
----NGCTN

PB0010.1_Egr1_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCGGGGCT--
ANTGCGGGGGCGGN

PB0202.1_Zfp410_2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCGGGGCT------
NNTNNGGGGCGGNGNGN

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCGGGGCT--
ATTGCCTGAGGCAAT

MA0524.1_TFAP2C/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCGGGGCT---
TGCCCTGGGGCNANN

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCGGGGCT-----
NNNAAGGGGGCGGGNNN

PB0110.1_Bcl6b_2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCGGGGCT-----
NNTNAGGGGCGGNNNN

MA0146.2_Zfx/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCGGGGCT-
GGGGCCGAGGCCTG

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCGGGGCT
CTAGGCCT