Information for motif4


Reverse Opposite:

p-value:1e-70
log p-value:-1.620e+02
Information Content per bp:1.674
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif7.13%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets50.3 +/- 25.9bp
Average Position of motif in Background48.2 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0159.1_Rfx4_2/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GTAACCGTGG--
NNNGTAACTANGNNA

MA0592.1_ESRRA/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTAACCGTGG
NGTGACCTTGG

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTAACCGTGG---
NGTTGCCATGGCAA

MA0130.1_ZNF354C/Jaspar

Match Rank:4
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:GTAACCGTGG--
------GTGGAT

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTAACCGTGG---
GGTTGCCATGGCAA

PB0158.1_Rfx3_2/Jaspar

Match Rank:6
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------GTAACCGTGG------
NNTNGNNGTAACCAAGNNNNAGN

PB0045.1_Myb_1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTAACCGTGG----
ATGGAAACCGTTATTTT

MA0509.1_Rfx1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTAACCGTGG----
GTTGCCATGGNAAC

PB0046.1_Mybl1_1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTAACCGTGG----
TTGAAAACCGTTAATTT

MA0600.1_RFX2/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GTAACCGTGG----
NNNCNGTTGCCATGGNAAC