Information for motif5


Reverse Opposite:

p-value:1e-69
log p-value:-1.600e+02
Information Content per bp:1.680
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif5.76%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets47.5 +/- 24.4bp
Average Position of motif in Background67.3 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-TTCTVAGAAAYN
TTTCTNAGAAAN-

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:2
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--TTCTVAGAAAYN
ATTTCCAAGAA---

MA0144.2_STAT3/Jaspar

Match Rank:3
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-TTCTVAGAAAYN
TTTCCCAGAAN--

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:4
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--TTCTVAGAAAYN
ATTTCCNGGAAATN

MA0137.3_STAT1/Jaspar

Match Rank:5
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-TTCTVAGAAAYN
TTTCCTGGAAA--

MA0518.1_Stat4/Jaspar

Match Rank:6
Score:0.83
Offset:-4
Orientation:reverse strand
Alignment:----TTCTVAGAAAYN
NNNTTTCCTGGAAA--

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:7
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-TTCTVAGAAAYN
TTTCCNGGAAAN-

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:8
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TTCTVAGAAAYN
NCTTCCNGGAAGNN

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:9
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TTCTVAGAAAYN--
TTTCCTGGAAAGNNN

PB0006.1_Bcl6b_1/Jaspar

Match Rank:10
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----TTCTVAGAAAYN
NNNATTCCTCGAAAGN