Information for motif6


Reverse Opposite:

p-value:1e-63
log p-value:-1.471e+02
Information Content per bp:1.681
Number of Target Sequences with motif73.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets53.2 +/- 26.6bp
Average Position of motif in Background71.8 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AAACTGARAA-
GAAACTGAAACT

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AAACTGARAA-
GAAAGTGAAAGT

MA0100.2_Myb/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAACTGARAA
CCAACTGCCA-

PB0022.1_Gata5_1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAACTGARAA------
TAAACTGATAAGAAGAT

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAACTGARAA-
GAAASYGAAASY

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AAACTGARAA
-AACCGANA-

MA0050.2_IRF1/Jaspar

Match Rank:7
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------AAACTGARAA-----
AAANNGAAAGTGAAAGTAAAN

MA0124.1_NKX3-1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAACTGARAA
ATACTTA---

PB0037.1_Isgf3g_1/Jaspar

Match Rank:9
Score:0.61
Offset:-8
Orientation:forward strand
Alignment:--------AAACTGARAA
CAAAATCGAAACTAA---

bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------AAACTGARAA--
WNAGTCADAVTGAAACTN