Information for motif9


Reverse Opposite:

p-value:1e-57
log p-value:-1.326e+02
Information Content per bp:1.810
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif5.03%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.4 +/- 24.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CGTCACCG
ACGTCA---

CRE(bZIP)/Promoter/Homer

Match Rank:2
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----CGTCACCG
GTGACGTCACCG

PB0004.1_Atf1_1/Jaspar

Match Rank:3
Score:0.68
Offset:-7
Orientation:forward strand
Alignment:-------CGTCACCG-
ACGATGACGTCATCGA

MA0018.2_CREB1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CGTCACCG
TGACGTCA---

PB0038.1_Jundm2_1/Jaspar

Match Rank:5
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------CGTCACCG-
CCGATGACGTCATCGT

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CGTCACCG----
NNGGCGACACCTCNNN

MA0067.1_Pax2/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGTCACCG
AGTCACGC

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CGTCACCG
TGACGTCATC-

PB0108.1_Atf1_2/Jaspar

Match Rank:9
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------CGTCACCG
NTTATTCGTCATNC

MA0117.1_Mafb/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGTCACCG
NCGTCAGC-