Information for motif1


Reverse Opposite:

p-value:1e-2900
log p-value:-6.679e+03
Information Content per bp:1.520
Number of Target Sequences with motif1150.0
Percentage of Target Sequences with motif24.41%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets24.7 +/- 8.7bp
Average Position of motif in Background29.2 +/- 2.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:1
Score:0.92
Offset:1
Orientation:forward strand
Alignment:RRACATGYYNRGACATGTCC-
-AACATGCCCAGACATGCCCN

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:2
Score:0.92
Offset:1
Orientation:forward strand
Alignment:RRACATGYYNRGACATGTCC-
-AACATGCCCAGACATGCCCN

p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer

Match Rank:3
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:RRACATGYYNRGACATGTCC-
-NGCATGTCNNGACATGCNNN

MA0106.2_TP53/Jaspar

Match Rank:4
Score:0.86
Offset:3
Orientation:reverse strand
Alignment:RRACATGYYNRGACATGTCC
---CATGTCTGGGCATGT--

MA0525.1_TP63/Jaspar

Match Rank:5
Score:0.86
Offset:0
Orientation:forward strand
Alignment:RRACATGYYNRGACATGTCC
AGACATGCCCAGACATGCCC

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.78
Offset:4
Orientation:reverse strand
Alignment:RRACATGYYNRGACATGTCC
----ATGCCCGGGCATGT--

PH0086.1_Irx5/Jaspar

Match Rank:7
Score:0.65
Offset:7
Orientation:forward strand
Alignment:RRACATGYYNRGACATGTCC----
-------AATATACATGTAAAATT

PH0082.1_Irx2/Jaspar

Match Rank:8
Score:0.63
Offset:7
Orientation:forward strand
Alignment:RRACATGYYNRGACATGTCC----
-------TAAATACATGTAAAATT

PH0083.1_Irx3_1/Jaspar

Match Rank:9
Score:0.62
Offset:7
Orientation:forward strand
Alignment:RRACATGYYNRGACATGTCC----
-------AAAATACATGTAATACT

PH0085.1_Irx4/Jaspar

Match Rank:10
Score:0.62
Offset:7
Orientation:forward strand
Alignment:RRACATGYYNRGACATGTCC----
-------AATATACATGTAAAACA