Information for motif12


Reverse Opposite:

p-value:1e-53
log p-value:-1.242e+02
Information Content per bp:1.522
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets25.5 +/- 7.8bp
Average Position of motif in Background18.7 +/- 2.2bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:1
Score:0.60
Offset:12
Orientation:reverse strand
Alignment:AACGCGACTGTGTTCCCGCA--
------------TTCCCGCCWG

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:2
Score:0.58
Offset:9
Orientation:forward strand
Alignment:AACGCGACTGTGTTCCCGCA-
---------VDTTTCCCGCCA

MA0470.1_E2F4/Jaspar

Match Rank:3
Score:0.57
Offset:10
Orientation:reverse strand
Alignment:AACGCGACTGTGTTCCCGCA-
----------NNTTCCCGCCC

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:10
Orientation:reverse strand
Alignment:AACGCGACTGTGTTCCCGCA
----------NYTTCCCGCC

MA0471.1_E2F6/Jaspar

Match Rank:5
Score:0.55
Offset:10
Orientation:reverse strand
Alignment:AACGCGACTGTGTTCCCGCA-
----------NCTTCCCGCCC

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:10
Orientation:reverse strand
Alignment:AACGCGACTGTGTTCCCGCA
----------DTTTCCCGCC

MA0024.2_E2F1/Jaspar

Match Rank:7
Score:0.53
Offset:11
Orientation:reverse strand
Alignment:AACGCGACTGTGTTCCCGCA--
-----------CCTCCCGCCCN

MA0469.1_E2F3/Jaspar

Match Rank:8
Score:0.52
Offset:12
Orientation:forward strand
Alignment:AACGCGACTGTGTTCCCGCA-------
------------CTCCCGCCCCCACTC

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:AACGCGACTGTGTTCCCGCA
---------CTGTTCCTGG-

PB0024.1_Gcm1_1/Jaspar

Match Rank:10
Score:0.51
Offset:9
Orientation:forward strand
Alignment:AACGCGACTGTGTTCCCGCA-----
---------TCGTACCCGCATCATT