Information for motif18


Reverse Opposite:

p-value:1e-46
log p-value:-1.067e+02
Information Content per bp:1.835
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets24.1 +/- 12.4bp
Average Position of motif in Background17.8 +/- 6.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GGCAACGG---
-NHAACBGYYV

MA0600.1_RFX2/Jaspar

Match Rank:2
Score:0.68
Offset:-8
Orientation:forward strand
Alignment:--------GGCAACGG---
GTTGCCATGGCAACCGCGG

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GGCAACGG
SCCTAGCAACAG

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------GGCAACGG-
CCGCATAGCAACGGA

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GGCAACGG--
--YAACBGCC

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:6
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GGCAACGG---
---AACCGANA

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------GGCAACGG-
TACCATAGCAACGGT

MA0510.1_RFX5/Jaspar

Match Rank:8
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------GGCAACGG-
CTCCCTGGCAACAGC

MA0509.1_Rfx1/Jaspar

Match Rank:9
Score:0.64
Offset:-8
Orientation:forward strand
Alignment:--------GGCAACGG
GTTGCCATGGCAAC--

PB0033.1_Irf3_1/Jaspar

Match Rank:10
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------GGCAACGG
GAGAACCGAAACTG