Information for motif19


Reverse Opposite:

p-value:1e-37
log p-value:-8.674e+01
Information Content per bp:1.864
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets28.3 +/- 12.1bp
Average Position of motif in Background20.6 +/- 2.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0024.1_Gcm1_1/Jaspar

Match Rank:1
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------CGGGTTYC-
NNNNATGCGGGTNNNN

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGGGTTYC---
-TGGTTTCAGT

PB0153.1_Nr2f2_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CGGGTTYC---
CGCGCCGGGTCACGTA

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CGGGTTYC
GKVTCADRTTWC

PB0034.1_Irf4_1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGGGTTYC------
TNTGGTTTCGATACN

PB0035.1_Irf5_1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGGGTTYC-------
NTGGTTTCGGTTNNN

PB0036.1_Irf6_1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CGGGTTYC------
NNNTTGGTTTCGNTNNN

PB0162.1_Sfpi1_2/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CGGGTTYC--------
--GGTTCCNNAATTTG

PB0156.1_Plagl1_2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CGGGTTYC-----
GCTGGGGGGTACCCCTT

MA0111.1_Spz1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGGGTTYC---
AGGGTAACAGC