Information for motif27


Reverse Opposite:

p-value:1e-25
log p-value:-5.791e+01
Information Content per bp:1.846
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets27.3 +/- 10.9bp
Average Position of motif in Background33.7 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0003.2_TFAP2A/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---AGCCTCGGGG--
CATTGCCTCAGGGCA

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:2
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AGCCTCGGGG---
-SCCTSAGGSCAW

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:AGCCTCGGGG---
-GCCTCAGGGCAT

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--AGCCTCGGGG---
NTNGCCTCAGGCNNN

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:5
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--AGCCTCGGGG---
NTCGCCTCAGGCAAT

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AGCCTCGGGG---
ATTCCCTGAGGGGAA

MA0524.1_TFAP2C/Jaspar

Match Rank:7
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AGCCTCGGGG--
CATGGCCCCAGGGCA

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AGCCTCGGGG---
TTGCCCTAGGGCAT

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGCCTCGGGG---
NTGCCCTTGGGCGN

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGCCTCGGGG---
TCACCTCTGGGCAG