Information for motif29


Reverse Opposite:

p-value:1e-22
log p-value:-5.152e+01
Information Content per bp:1.666
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets25.7 +/- 12.1bp
Average Position of motif in Background21.4 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0039.2_Klf4/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCAGCGCCCT
GCCCCACCCA

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCAGCGCCCT
GCCMCRCCCH

MA0599.1_KLF5/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCAGCGCCCT
GCCCCGCCCC

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCAGCGCCCT-
GGCCCCGCCCCC

PB0039.1_Klf7_1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCAGCGCCCT---
TCGACCCCGCCCCTAT

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCGCCCT--
NAGCCCCGCCCCCN

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GCAGCGCCCT-
NNNANTGCAGTGCNNTT

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCAGCGCCCT---
NNNGGGGCGCCCCCNN

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCGCCCT---
ANCGCGCGCCCTTNN

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCAGCGCCCT
---GCTCCG-