Information for motif6


Reverse Opposite:

p-value:1e-86
log p-value:-1.982e+02
Information Content per bp:1.497
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets26.9 +/- 13.7bp
Average Position of motif in Background23.0 +/- 1.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GSCGGCTR----
AGCTCGGCGCCAAAAGC

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GSCGGCTR----
CCTTCGGCGCCAAAAGG

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GSCGGCTR---
NAGANTGGCGGGGNGNA

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GSCGGCTR
AGCGCGCC--

MA0024.2_E2F1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GSCGGCTR-
CGGGCGGGAGG

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------GSCGGCTR
CAAGATGGCGGC--

PB0110.1_Bcl6b_2/Jaspar

Match Rank:7
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------GSCGGCTR-
NNTNAGGGGCGGNNNN

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GSCGGCTR--
GGCGGGAAAH

PB0151.1_Myf6_2/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GSCGGCTR-----
GGNGCGNCTGTTNNN

MA0470.1_E2F4/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GSCGGCTR--
GGGCGGGAAGG