Information for motif13


Reverse Opposite:

p-value:1e-19
log p-value:-4.479e+01
Information Content per bp:1.631
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif3.18%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets30.1 +/- 8.9bp
Average Position of motif in Background14.7 +/- 3.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGAGATTCA
GGGAGGACNG---

PH0129.1_Otx1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGAGGAGATTCA-----
AGAGGGGATTAATTTAT

MA0467.1_Crx/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGAGGAGATTCA
-AAGAGGATTAG

MA0489.1_JUN_(var.2)/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGAGGAGATTCA-
AGGAGATGACTCAT

MA0079.3_SP1/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GGAGGAGATTCA
GGGGGCGGGGC----

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGAGATTCA
NACAGGAAAT---

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GGAGGAGATTCA
AGGGGGCGGGGCTG--

PH0138.1_Pitx2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGAGGAGATTCA-----
TGAAGGGATTAATCATC

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGAGATTCA
CGGAGC-------

PH0121.1_Obox1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GGAGGAGATTCA----
TTAAGGGGATTAACTAC